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Table 1 Clinical and chromosomal characteristics of the 29 cases with pathogenic/likely pathogenic CNVs detected

From: Association of prenatal Cleft Lip and Palate ultrasound abnormalities with copy number variants at a single Chinese tertiary center

Case

MA (years)

GA (weeks)

Ultrasound Findings

CMA Results

Type of CNV

Size

Outcome

1

27.1

25.3

Isolated CP

arr18q22.3q23(70,661,548–78,013,728) × 1

arr20p13p11.23(61,662–19,077,891) × 3

Deletion

Duplication

7.35 Mb

19.02 Mb

TOP

2

26.5

26.4

Isolated CLP

arr4p16.3p15.33(68,345–12,696,000) × 1

Deletion

12.63 Mb

TOP

3

31.3

30.6

Isolated CLP

arr10q26.3(131,063,320–135,426,386) × 3

Duplication

4.36 Mb

TOP

4

25.6

26.0

Isolated CLP

arr4p16.3p15.33(68,345–11,779,280) × 1

Deletion

11.71 Mb

TOP

5

31.4

23.4

Isolated CLP

barr2p16.3(51,003,279–51,294,688) × 1

Deletion

291 Kb

Live birth

6a

35.3

27.2

Isolated CLP

arr16p11.2(29,580,021–30,190,029) × 1

Deletion

610 Kb

TOP

7

32.1

23.0

Isolated CLP

arr16p11.2(29,580,020–30,177,240) × 3

Duplication

597 Kb

TOP

8

41.3

14.0

Isolated CLP

arr(18) × 3

Duplication

77.88 Mb

TOP

9

26.6

19.6

CLP; forebrain malformation; pleural effusion; PRUV

barr6p25.3p24.3(156,975–9,116,357) × 3

arr21q22.13q22.3(38,242,327–48,093,361) × 1

Duplication

Deletion

8.96 Mb

9.85 Mb

TOP

10

27.0

25.6

CLP; micrognathia, CM; AVSD;

biventricular enlargement

arr21q22.11(32,920,742–35,430,729) × 1

Deletion

2.51 Mb

TOP

11

39.5

12.0

CLP; NT 3.42 mm

arr12p13.33q12(173,786–34,835,837) × 2 ~ 3 mos

Duplication

38.05 Mb

TOP

12

42.6

12.1

CLP; NT 3.4 mm

arr(X) × 2

Duplication

155.1 Mb

TOP

13

32.3

14.3

CLP; absence of nasal bone; NT 4.25mmn

arr(18) × 3

Duplication

77.88 Mb

TOP

14

40.4

12.4

CLP; NT 4.32mmn

arr(13) × 3

Duplication

95.67 Mb

TOP

15

26.2

12.9

CLP; CH

arr(13) × 3

Duplication

95.67 Mb

TOP

16

34.5

28.6

CLP; renal agenesis

arr7q21.11(83,185,592–85,012,428) × 3

Duplication

1.83 Mb

TOP

17

25.7

26.0

CP; micrognathia

arr15q13.2q13.3(30,896,329–32,451,856) × 1

Deletion

1.56 Mb

TOP

18

34.6

24.0

CP; micrognathia

arr4q34.1q35.2(173,730,512–189,068,526) × 1

Deletion

15.3 Mb

TOP

19

32.7

25.4

CLP; bifid nose

barr11p11.12q11(51,126,723–54,720,810) × 3

Duplication

3.59 Mb

TOP

20

27.0

25.4

CLP

arr7q32.2q36.3(130,394,280–159,119,707) × 1

arr16p11.2q11.2(31,998,168–46,463,769) × 3

Deletion

Duplication

28.73 Mb

14.47 Mb

TOP

21

29.7

19.6

CLP; single atrium; CTGA

arr(13) × 3

Duplication

95.67 Mb

TOP

22

32.3

14.3

CLP; absence of nasal bone; NT 4.25 mm

arr(18) × 3

Duplication

77.88 Mb

TOP

23a

38.3

22.2

CLP; hypoplastic nasal bone; long bone

(− 1.64 SD)

arr(21) × 3

Duplication

33.09 Mb

TOP

24

28.4

25.6

CLP; forebrain malformation; cardiac malformations

arr(13) × 3

Duplication

95.67 Mb

TOP

25a

28.8

24.6

CLP; forebrain malformation; CM; pyelic separation

arr(13) × 3

Duplication

95.67 Mb

TOP

26

25.6

26.4

CLP; SUA; Dandy-Walker; DORV

arr(13) × 3

Duplication

95.67 Mb

TOP

27

23.5

24.6

CLP; hydrocephalus

arr(13) × 3

Duplication

95.67 Mb

TOP

28

28.3

23.3

CLP; SUA

arr(13) × 3

Duplication

95.67 Mb

TOP

29

43.2

12.2

CLP; micrognathia; cardiac malformations; CH

arr(13) × 3

Duplication

95.67 Mb

TOP

  1. CLP Cleft lip and palate, CP Cleft palate, GA Gestational age, MA Maternal age, CNVs Copy number variations, mos mosaicism, TOP Termination of pregnancy, PRUV Persistent right umbilical vein, CM Low-lying conus medullaris, CTGA Complete transposition of great arteries, AVSD Atrioventricular septal defect, NT Nuchal translucency, SUA Single umbilical artery, DORV Double outlet right ventricle, CH Cystic hygroma
  2. a: one of twin fetuses, b: likely pathogenic CNV